The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.
A visual pipeline to process images with Tapenade in Napari
Cell/nuclei counter using cellpose models
A napari plugin for artifact removal, noise reduction, contrast enhancement and stack brightness correction of Cryo-FIB/SEM image stacks.
Import Trackmate XML files for Track Visualization and analysis in Napari.
Napari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.
Core functionality for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.
A napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.
A Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays
A plugin for plotting intensity profiles with control features in napari.
A simple napari plugin to load swc file to napari viewer
A deep learning toolbox for decoding animal behaviour
Brainways
Light field imaging plugin for napari
Bacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.
A Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.