Plugins

Browse plugins: 458

Feature Forest

featureforest

A napari plugin for segmentation using vision transformer models' features

    • First released:

      10 October 2024
    • Last updated:

      16 October 2024
    • Installs:

      10
    • Plugin type:

      Widget
    Workflow step:
    Image segmentation
    Image annotation

    neuralDev

    napari-ndev

    A collection of widgets to process images from start to finish--focused on neural development.

    • Tim Monko
    • First released:

      31 January 2023
    • Last updated:

      16 October 2024
    • Installs:

      567
    • Plugin type:

      Reader, Widget

    napari ConvPaint

    napari-convpaint

    A plugin for segmentation by pixel classification using convolutional feature extraction

    • Guillaume Witz
    • First released:

      01 November 2023
    • Last updated:

      15 October 2024
    • Installs:

      1.9K
    • Plugin type:

      Sample data, Widget

    microscope-napari

    microscope-napari

    Nanobiosensorics microscopic napari plugin.

    • Nanobiosensorics
    • First released:

      21 June 2024
    • Last updated:

      15 October 2024
    • Installs:

      115
    • Plugin type:

      Sample data, Widget

    3D Counter

    napari-3d-counter

    A simple plugin for counting objects in 3D images

    • Peter Newstein
    • First released:

      18 October 2023
    • Last updated:

      15 October 2024
    • Installs:

      485
    • Plugin type:

      Widget

    napari-assistant

    napari-assistant

    A pocket calculator like interface to image processing in napari

    • Robert Haase
    • Ryan Savill
    • First released:

      05 March 2022
    • Last updated:

      15 October 2024
    • Installs:

      21K
    • Plugin type:

      Widget

    napari-bbox-spfluo

    napari-bbox-spfluo

    A new layer for bounding boxes in 2+ dimensions. Fork of napari-bbox for spfluo-app needs.

      • First released:

        04 October 2024
      • Last updated:

        15 October 2024
      • Installs:

        62
      • Plugin type:

        information not submitted

      napari_svetlana

      napari-svetlana

      A classification plugin for the ROIs of a segmentation mask.

      • Clément Cazorla
      • First released:

        22 November 2022
      • Last updated:

        15 October 2024
      • Installs:

        1.2K
      • Plugin type:

        Reader, Widget, Writer

      Tomocube data viewer

      napari-tomocube-data-viewer

      A plugin to visualize three-dimensional data from Tomocube's microscopy

        • First released:

          06 March 2023
        • Last updated:

          15 October 2024
        • Installs:

          177
        • Plugin type:

          Reader

        napari Sediment

        napari-sediment

        A plugin to process hyperspectral images of sediments

        • Guillaume Witz
        • First released:

          23 September 2024
        • Last updated:

          14 October 2024
        • Installs:

          54
        • Plugin type:

          Reader, Widget

        napatrackmater

        napatrackmater

        Import Trackmate XML files for Track Visualization and analysis in Napari.

        • Varun Kapoor
        • Mari Tolonen
        • Jakub Sedzinski
        • First released:

          16 January 2021
        • Last updated:

          14 October 2024
        • Installs:

          6.2K
        • Plugin type:

          information not submitted

        napari-zplane-depth-colorizer

        napari-zplane-depth-colorizer

        A simple plugin to color and merge z-planes of 3D data to give depth information.

        • Mai Hoang
        • First released:

          14 October 2024
        • Last updated:

          14 October 2024
        • Installs:

          7
        • Plugin type:

          Widget
        Workflow step:
        Visualization
        Image annotation

        napari-pyav

        napari-pyav

        Napari plugin for reading videos using PyAV

        • jlab.berlin
        • First released:

          05 October 2024
        • Last updated:

          14 October 2024
        • Installs:

          29
        • Plugin type:

          information not submitted

        vollseg-napari-trackmate

        vollseg-napari-trackmate

        Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library

        • Varun Kapoor
        • Mari Tolonen
        • Jakub Sedzinski
        • First released:

          31 December 2022
        • Last updated:

          14 October 2024
        • Installs:

          1.4K
        • Plugin type:

          Sample data, Widget

        napari_video

        napari_video

        napari plugin for reading videos.

        • Jan Clemens
        • First released:

          27 February 2021
        • Last updated:

          13 October 2024
        • Installs:

          0
        • Plugin type:

          Reader