CellPose Counter
cellpose-counterCell/nuclei counter using cellpose models
- Nicolas Buitrago
First released:
21 November 2024Last updated:
21 November 2024Installs:
0Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Plugins
Browse plugins: 472
Cryo-FIB/SEM Image Stacks Post-Processing
napari-cryofibsem-imgprocA napari plugin for artifact removal, noise reduction, contrast enhancement and stack brightness correction of Cryo-FIB/SEM image stacks.
- Shaina V. To
First released:
20 September 2024Last updated:
19 November 2024Installs:
45Plugin type:
Sample data, Widget
napatrackmater
napatrackmaterImport Trackmate XML files for Track Visualization and analysis in Napari.
- Varun Kapoor
- Mari Tolonen
- Jakub Sedzinski
First released:
16 January 2021Last updated:
19 November 2024Installs:
6.6KPlugin type:
information not submitted
Lattice Lightsheet Analysis
napari-latticeNapari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.
- Pradeep Rajasekhar
- Lachlan Whitehead
- Robert Haase
- Michael Milton
First released:
19 July 2022Last updated:
19 November 2024Installs:
509Plugin type:
Reader, Widget
lls-core
lls-coreCore functionality for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.
- Pradeep Rajasekhar
- Lachlan Whitehead
- Robert Haase
- Michael Milton
First released:
19 November 2024Last updated:
19 November 2024Installs:
12Plugin type:
information not submitted
napari-nifti
napari-niftiA napari plugin for reading and writing NIFTI files that have the extension .nii or .nii.gz.
- Karol Gotkowski
First released:
18 April 2023Last updated:
18 November 2024Installs:
2.7KPlugin type:
Reader, Writer
napari prism
napari-prismA Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays
- Rafael Tubelleza
First released:
14 November 2024Last updated:
16 November 2024Installs:
40Plugin type:
Reader, Widget
Intensity Plotter
napari-intensity-plotterA plugin for plotting intensity profiles with control features in napari.
- Toranosuke Takagi
First released:
20 October 2024Last updated:
15 November 2024Installs:
47Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
napari-swc-reader
napari-swc-readerA simple napari plugin to load swc file to napari viewer
- Clément Caporal
First released:
14 November 2024Last updated:
14 November 2024Installs:
18Plugin type:
Reader, Sample data
PoseR
PoseR-napariA deep learning toolbox for decoding animal behaviour
- Pierce Mullen
First released:
21 February 2023Last updated:
14 November 2024Installs:
118Plugin type:
Widget
Brainways
brainwaysBrainways
- Ben Kantor
First released:
26 May 2023Last updated:
14 November 2024Installs:
2.2KPlugin type:
Reader, Sample data, Widget
napari LF
napari-LFLight field imaging plugin for napari
- Geneva Schlafly
- Amitabh Verma
- Rudolf Oldenbourg
First released:
21 July 2022Last updated:
13 November 2024Installs:
184Plugin type:
Reader, Sample data, Widget, Writer
BacSEG
napari-bacsegBacterial segmentation and analysis platform than can inport/export files in multiple formats. Integrating many tools such as Cellpose, ColiCoords, Oufti/MicrobeTracker.
First released:
24 February 2023Last updated:
13 November 2024Installs:
679Plugin type:
Widget
molSEEQ
napari-molseeqA Napari plugin for extracting single molecule sequences from single/multi-channel SMLM microscopy data.
- Piers Turner
First released:
25 July 2024Last updated:
13 November 2024Installs:
44Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
napari-itk-io
napari-itk-ioFile IO with itk for napari
- Matt McCormick
First released:
28 April 2021Last updated:
13 November 2024Installs:
3.3KPlugin type:
information not submitted