neurofly
neuroflyA framework to annotate single neurons at whole-brain scale
First released:
30 October 2024Last updated:
30 October 2024Installs:
0Plugin type:
Widget
Plugins
Browse plugins: 464
Box Manager
napari-boxmanagerParticle selection tool for cryo-em
- Markus Stabrin
First released:
26 September 2022Last updated:
30 October 2024Installs:
5.2KPlugin type:
Reader, Widget, Writer
qhyccd-capture
qhyccd-captureThe basic operations for QHYCCD series cameras
- QHYCCD
First released:
23 October 2024Last updated:
30 October 2024Installs:
43Plugin type:
information not submitted
Napari Signal Selector
napari-signal-selectorAn interactive signal selector for napari, based on matplotlib.
- Marcelo Leomil Zoccoler
First released:
17 October 2023Last updated:
29 October 2024Installs:
225Plugin type:
Sample data, Widget
Save multidimensional file as folder of tifs
napari-file2folderSave multidimensional file as folder of tifs
- Jules Vanaret
First released:
28 October 2024Last updated:
28 October 2024Installs:
5Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Segment Anything V2
napari-SAMV2Napari plugin for segment anything version 2 model from meta. Plugin primarily useful for segmenting 3d volumetric data or 3d time series data.
- Krishnan Venkataraman
First released:
08 October 2024Last updated:
28 October 2024Installs:
73Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Tapenade Processing
napari-tapenade-processingA visual pipeline to process images with Tapenade in Napari
- Jules Vanaret
- Alice Gros
- Valentin Dunsing Eichenauer
- Agathe Rostan
- Philippe Roudot
- Pierre-François Lenne
- Léo Guignard
- Sham Tlili
First released:
13 August 2024Last updated:
28 October 2024Installs:
70Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Orthogonal Viewer
napari-simple-orthoviewerA simple orthogonal viewer in napari
- Krishnan Venkataraman
First released:
08 October 2024Last updated:
28 October 2024Installs:
46Plugin type:
Widget
Workflow step:
Visualization
napari-ndev
napari-ndevA collection of widgets to process images from start to finish--focused on neural development.
- Tim Monko
First released:
31 January 2023Last updated:
28 October 2024Installs:
642Plugin type:
information not submitted
skan
skanSkeleton analysis in Python
First released:
08 November 2016Last updated:
28 October 2024Installs:
63KPlugin type:
information not submitted
Cut Detector
cut-detectorAutomatic Cut Detector
- Thomas Bonte
First released:
17 October 2023Last updated:
28 October 2024Installs:
482Plugin type:
Widget
napari-segment-blobs-and-things-with-membranes
napari-segment-blobs-and-things-with-membranesA plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes
- Robert Haase
First released:
25 September 2021Last updated:
25 October 2024Installs:
16KPlugin type:
Widget
Feature Forest
featureforestA napari plugin for segmentation using vision transformer models' features
First released:
10 October 2024Last updated:
24 October 2024Installs:
42Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
Cell Analyzer
mmv-h4cellsA simple plugin to help with analyzing cells in napari
- Lennart Kowitz
First released:
24 October 2024Last updated:
24 October 2024Installs:
9Plugin type:
Reader, Widget, Writer
VASCilia
Napari-VASCiliaVASCilia (Vision Analysis StereoCilia): A Napari Plugin for Deep Learning-Based 3D Analysis of Cochlear Hair Cell Stereocilia Bundles
- Yasmin Kassim
First released:
28 June 2024Last updated:
23 October 2024Installs:
64Plugin type:
Widget
Workflow step:
Image segmentation
Visualization
Image annotation