The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Vessel Quality Check

VessQC

Napari plugin for checking and correcting the segmentation

    Workflow step:
    Image annotation
    Image segmentation

    License BSD-3 PyPI Python Version tests codecov napari hub

    A plugin for a vessel quality check


    This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

    Installation

    You can install VessQC via pip:

    pip install VessQC

    To install latest development version :

    pip install git+https://github.com/MMV-Lab/VessQC.git

    Contributing

    Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

    License

    Distributed under the terms of the BSD-3 license, "VessQC" is free and open source software

    Issues

    If you encounter any problems, please file an issue along with a detailed description.

    Version:

    • 0.6.1

    Last updated:

    • 13 March 2025

    First released:

    • 18 February 2025

    License:

    Supported data:

    • Information not submitted

    Plugin type:

    GitHub activity:

    • Stars: 0
    • Forks: 0
    • Issues + PRs: 0

    Python versions supported:

    Operating system:

    Requirements:

    • napari
    • numpy
    • qtpy
    • scipy
    • SimpleITK
    • tifffile