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Varun Kapoor

# vollseg-napari-mtrack

[![License BSD-3](https://img.shields.io/pypi/l/vollseg-napari-mtrack.svg?color=green)](https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/raw/main/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/vollseg-napari-mtrack.svg?color=green)](https://pypi.org/project/vollseg-napari-mtrack)
[![Python Version](https://img.shields.io/pypi/pyversions/vollseg-napari-mtrack.svg?color=green)](https://python.org)
[![tests](https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/workflows/tests/badge.svg)](https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/actions)
[![codecov](https://codecov.io/gh/Kapoorlabs-CAPED/vollseg-napari-mtrack/branch/main/graph/badge.svg)](https://codecov.io/gh/Kapoorlabs-CAPED/vollseg-napari-mtrack)
[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/vollseg-napari-mtrack)](https://napari-hub.org/plugins/vollseg-napari-mtrack)

Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch

----------------------------------

Elaborate documentation for users of this repository at this [documentation]

This [napari] plugin was generated with [Cookiecutter] using [@caped]'s [cookiecutter-napari-plugin] template.



## Installation

You can install `vollseg-napari-mtrack` via [pip]:

    pip install vollseg-napari-mtrack



To install latest development version :

    pip install git+https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack.git


## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [BSD-3] license,
"vollseg-napari-mtrack" is free and open source software

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[@caped]: https://github.com/Kapoorlabs-CAPED/
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/Kapoorlabs-CAPED/cookiecutter-kapoorlabs-napari-plugin
[documentation]: https://kapoorlabs-caped.github.io/vollseg-napari-mtrack
[file an issue]: https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack/issues

[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/

vollseg-napari-mtrack






Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch

Elaborate documentation for users of this repository at this documentation
This napari plugin was generated with Cookiecutter using @caped's cookiecutter-napari-plugin template.

Installation
You can install vollseg-napari-mtrack via pip:
pip install vollseg-napari-mtrack

To install latest development version :
pip install git+https://github.com/Kapoorlabs-CAPED/vollseg-napari-mtrack.git

Contributing
Contributions are very welcome. Tests can be run with tox, please ensure
the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license,
"vollseg-napari-mtrack" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.

vollseg-napari-mtrack

Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch

VollSeg Napari MTrack Plugin

Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dynamic instability parameters for individual kymographs and also in batch

Installation¶

Contributing¶

License¶

Issues¶