Napari Topological Skeleton Analysis

Extracts and analyses topological skeletons as undirected graphs

Extracts and analyses topological skeletons as undirected graphs. For usage instructions and API reference, please refer to the documentation:

The functionality of the plugin comprises the following:

Extracting the topological skeleton of a binary image using the medial axis transform.
Extracting the netowrk of the skeleton as an undirected networkx graph.
Computing features of individual skeleton components as well as the entire skeleton network.

This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

You can install napari-toska via pip:

pip install napari-toska

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

Distributed under the terms of the BSD-3 license, "napari-toska" is free and open source software

If you encounter any problems, please [file an issue] along with a detailed description.

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