The napari hub is transitioning to a community-run implementation due to launch in June 2025.
Since October 1, 2024, this version is no longer actively maintained and will not be updated. New plugins and plugin updates will continue to be listed.

Napari Topological Skeleton Analysis

napari-toska

Extraacts and analyses topological skeletons as undirected graphs

License BSD-3 PyPI Python Version tests codecov napari hub

Extraacts and analyses topological skeletons as undirected graphs


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install napari-toska via pip:

pip install napari-toska

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "napari-toska" is free and open source software

Issues

If you encounter any problems, please [file an issue] along with a detailed description.

Version:

  • 0.0.1

Last updated:

  • 08 July 2024

First released:

  • 08 July 2024

License:

Supported data:

  • Information not submitted

Plugin type:

GitHub activity:

  • Stars: 4
  • Forks: 1
  • Issues + PRs: 1

Python versions supported:

Operating system:

Requirements:

  • numpy
  • magicgui
  • qtpy
  • scikit-image>=0.21.0
  • networkx
  • scipy
  • napari-workflows
  • napari-skimage-regionprops