Synaptogram

Evaluate synapse ribbon counts in confocal data

  • Brad Buran

License MIT PyPI Python Version tests codecov napari hub npe2 Copier

Tools to count synaptic ribbons in confocal data.


Installation

You can install napari-synaptogram via pip:

pip install napari-synaptogram

If napari is not already installed, you can install napari-synaptogram with napari and Qt via:

pip install "napari-synaptogram[all]"

To install latest development version :

pip install git+https://github.com/bburan/napari-synaptogram.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the MIT license, "napari-synaptogram" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Version:

  • 0.0.3

Last updated:

  • 2025-11-07

First released:

  • 2025-11-06

License:

  • MIT

Supported data:

  • Information not submitted

Plugin type:

Open extension:

Save extension:

Python versions supported:

Operating system:

  • Information not submitted

Requirements:

  • numpy
  • magicgui
  • qtpy
  • scikit-image
  • synaptogram>=0.0.11
  • cochleogram[czi]>=0.10.2
  • napari[all]; extra == "all"
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