lazystack

A napari plugin wrapping lazystack: a lightweight, cross-platform, unified interface for lazily reading scientific image stacks.

A napari reader wrapping lazystack: a lightweight, cross-platform unified interface for lazily reading scientific image stacks.

Supported formats

HDF (via h5py) — datasets must be (num_images, height, width) grayscale images.
TIFF and other TIFF-family files (via tifffile) — grayscale stacks only; colour/multichannel images and hyperstacks are not supported.
Hamamatsu DCIMG (.dcimg).
Hamamatsu HIS (.his).

This napari plugin was generated with copier using the napari-plugin-template.

You can install napari-lazystack via pip:

pip install napari-lazystack

If napari is not already installed, you can install napari-lazystack with napari and Qt via:

pip install "napari-lazystack[all]"

To install latest development version:

pip install git+https://github.com/domjurkschat/napari-lazystack.git

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

Distributed under the terms of the BSD-3 license, "napari-lazystack" is free and open source software

If you encounter any problems, please file an issue along with a detailed description.

Version:

Last updated:

First released:

License:

Supported data:

Plugin type:

Open extension:

Save extension:

Python versions supported:

Operating system:

Requirements: