Hyperspectral Imaging Analysis Plugin

A Napari plugin to perform analysis on Hyperspectral Imaging datasets.

The 'Data Manager' widget loads, opens and visualize the datasets. The 'Fusion' widget fused two or three opened datasets. The 'UMAP' widget perform and visualize the Uniform Manifold Approximation and Projection analysis.

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This napari plugin was generated with copier using the napari-plugin-template.

Installation¶

You can install napari-hsi-analysis via pip:

pip install napari-hsi-analysis

To install latest development version :

pip install git+https://github.com/alessiadb/napari-hsi-analysis.git

Usage¶

A detailed guide which shows how to use the plugin and how to properly choose the parameters can be found here.

Contributing¶

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License¶

Distributed under the terms of the BSD-3 license, "napari-hsi-analysis" is free and open source software

Issues¶

If you encounter any problems, please file an issue along with a detailed description.