BioPB

Performing image analysis by visiting biopb endpoints

  • Ji Yu

License MIT PyPI Python Version tests codecov napari hub

A biopb plugin for napari.

Installation

You can install napari-biopb via pip:

pip install napari-biopb

To install latest development version :

pip install git+https://github.com/jiyuuchc/napari-biopb.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the MIT license, "napari-biopb" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Version:

  • 0.2.2

Last updated:

  • 2026-04-14

First released:

  • 2025-02-02

License:

  • MIT

Supported data:

  • Information not submitted

Plugin type:

Open extension:

Save extension:

Python versions supported:

Operating system:

  • Information not submitted

Requirements:

  • numpy
  • pandas
  • magicgui
  • qtpy
  • scikit-image
  • biopb>=0.3.0
  • opencv-python-headless
  • grpcio_tools
  • grpcio-health-checking
  • vedo
  • platformdirs
  • tox; extra == "testing"
  • pytest; extra == "testing"
  • pytest-cov; extra == "testing"
  • pytest-qt; extra == "testing"
  • pytest-env; extra == "testing"
  • napari; extra == "testing"
  • pyqt6; extra == "testing"
  • napari-skimage-regionprops; extra == "tables"
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