MOBIOFOX

A napari plugin implementing a pipeline for MOrphometric BIOgenicity analysis of purported microFOssil (P)XCT scans.

  • Adrian Surojit Müller

License BSD-3 PyPI Python Version tests codecov napari hub npe2 Copier

A napari plugin implementing a pipeline for MOrphometric BIOgenicity analysis of purported microFOssil (P)XCT scans.

This napari plugin was generated with copier using the napari-plugin-template.

Installation

You can install mobiofox via pip:

pip install mobiofox

To install latest development version :

pip install git+https://github.com/OwlSurojit/mobiofox.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "mobiofox" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Version:

  • 0.1.0

Last updated:

  • 2025-07-21

First released:

  • 2025-07-21

License:

  • Copyright (c) 2025, Adrian Sur...

Supported data:

  • Information not submitted

Plugin type:

Open extension:

Save extension:

Python versions supported:

Operating system:

  • Information not submitted

Requirements:

  • numpy
  • napari
  • magicgui
  • matplotlib
  • qtpy
  • scikit-image
  • scipy
  • pandas
  • scikit-learn
  • sip
  • meshio
  • seaborn
  • tox; extra == "testing"
  • pytest; extra == "testing"
  • pytest-cov; extra == "testing"
  • pytest-qt; extra == "testing"
  • napari; extra == "testing"
  • pyqt5; extra == "testing"
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