WSI Reader
napari-wsiA plugin to read whole-slide images within napari.
First released:
01 February 2023Last updated:
05 February 2025Installs:
505Plugin type:
Reader, Widget
Plugins
Browse plugins: 475
Napari Brainbow Diagnose
napari-brainbow-diagnoseVisualize and Diagnose brainbow dataset in color space.
- Clement Caporal
First released:
25 January 2023Last updated:
04 February 2025Installs:
201Plugin type:
Sample data, Widget
Filter labels by properties
napari-filter-labels-by-propA simple plugin to filter labels by properites.
- Loïc Sauteur
First released:
24 January 2025Last updated:
04 February 2025Installs:
17Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
ads_napari
ads-napariAxon/Myelin segmentation using AI
- NeuroPoly Lab
First released:
03 February 2025Last updated:
04 February 2025Installs:
20Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
single-cell segmentation
napari-biopbPerforming single-cell segmentation by visiting biopb endpoints
- Ji Yu
First released:
02 February 2025Last updated:
02 February 2025Installs:
2Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
SegSelect
napari-segselectSelect a connected component from a membrain-seg segmentation.
- Benedikt Wimmer
First released:
31 January 2025Last updated:
31 January 2025Installs:
20Plugin type:
Reader, Widget, Writer
Workflow step:
Image annotation
MMV-playground
MMV-playgroundNapari plugin for 2D microscopy segmentation
- Peter Lampen
First released:
30 January 2025Last updated:
31 January 2025Installs:
26Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Lattice Lightsheet Analysis
napari-latticeNapari plugin for analysing and visualizing lattice lightsheet and Oblique Plane Microscopy data.
- Pradeep Rajasekhar
- Lachlan Whitehead
- Robert Haase
- Michael Milton
First released:
19 July 2022Last updated:
31 January 2025Installs:
551Plugin type:
Reader, Widget
napari OME-Zarr Navigator
napari-ome-zarr-navigatorA plugin to browse OME-Zarr plates by conditions and load images, labels and features from ROIs
- Fabio Steffen
- Joel Luethi
First released:
19 July 2024Last updated:
29 January 2025Installs:
232Plugin type:
Sample data, Widget
Workflow step:
Visualization
napari OMAAS
napari-omaasnapari-OMAAS stands for Optical Mapping Acquisition and Analysis Software
- Ruben Lopez
First released:
09 August 2022Last updated:
29 January 2025Installs:
167Plugin type:
Reader, Sample data, Widget, Writer
eHooke
napari-ehookeeHooke implementation within napari
- António Brito
First released:
02 March 2023Last updated:
29 January 2025Installs:
387Plugin type:
Sample data, Widget
napari-zplane-depth-colorizer
napari-zplane-depth-colorizerA simple plugin to color and merge z-planes of 3D data to give depth information.
- Mai Hoang
First released:
14 October 2024Last updated:
29 January 2025Installs:
60Plugin type:
Widget
Workflow step:
Visualization
Image annotation
Tapenade Processing
napari-tapenade-processingA visual pipeline to process images with Tapenade in Napari
- Jules Vanaret
First released:
13 August 2024Last updated:
28 January 2025Installs:
216Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
BrainGlobe Registration
brainglobe-registrationA napari plugin for registration to a BrainGlobe atlas.
First released:
27 January 2025Last updated:
28 January 2025Installs:
19Plugin type:
Sample data, Widget
brainrender
brainrender-napariA napari plugin to render BrainGlobe atlases and associated data as layers.
First released:
13 October 2023Last updated:
27 January 2025Installs:
3.9KPlugin type:
Widget