Vessel Quality Check
VessQCNapari plugin for checking and correcting the segmentation
First released:
18 February 2025Last updated:
13 March 2025Installs:
24Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
Plugins
Browse plugins: 489
psf-analysis-CFIM
psf-analysis-CFIMA continuation of napari_psf_analysis, developed for CFIM - KU
- Markus L. Bille
First released:
11 February 2025Last updated:
13 March 2025Installs:
86Plugin type:
Reader, Widget
napari-omero
napari-omeronapari/OMERO interoperability
- Peter Sobolewski
First released:
24 June 2020Last updated:
12 March 2025Installs:
793Plugin type:
Reader, Widget
Hyperspectral Imaging Analysis Plugin
napari-hsi-analysisNapari plugin to perform analysis on Hyperspectral Imaging datasets.
- Alessia Di Benedetto
First released:
12 March 2025Last updated:
12 March 2025Installs:
20Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
nnInteractive
napari-nninteractivennInteractive plugin for Napari
First released:
11 March 2025Last updated:
11 March 2025Installs:
33Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
napari-locan
napari-locanUse locan methods in napari for single-molecule localization microscopy data.
- napari-locan Developers
First released:
29 October 2023Last updated:
11 March 2025Installs:
173Plugin type:
Sample data, Widget
T-MIDAS
napari-tmidasTissue Microscopy Image Data Analysis Suite
- Marco Meer
First released:
05 March 2025Last updated:
10 March 2025Installs:
27Plugin type:
Reader, Sample data, Widget, Writer
Workflow step:
Image segmentation
Image annotation
PartSeg
PartSegPartSeg is python GUI and set of napari plugins for bio imaging analysis especially nucleus analysis,
First released:
14 January 2019Last updated:
10 March 2025Installs:
8.1KPlugin type:
Reader, Widget, Writer
brainreg
brainregAutomated multi-atlas whole-brain microscopy registration
First released:
26 May 2020Last updated:
10 March 2025Installs:
12KPlugin type:
Sample data, Widget
BrainGlobe
brainglobe-utilsShared general purpose tools for the BrainGlobe project
First released:
23 June 2023Last updated:
10 March 2025Installs:
30KPlugin type:
Widget
cellfinder
cellfinderAutomated 3D cell detection in large microscopy images
First released:
17 January 2020Last updated:
10 March 2025Installs:
11KPlugin type:
Sample data, Widget
movement
movementAnalysis of body movement
First released:
02 April 2020Last updated:
10 March 2025Installs:
3.2KPlugin type:
Widget
DINOSim Segmentation
napari-dinosimA simple plugin to use DinoSim in napari
- Aitor Gonzalez-Marfil
First released:
05 March 2025Last updated:
09 March 2025Installs:
81Plugin type:
Widget
Workflow step:
Image segmentation
Image annotation
single-cell segmentation
napari-biopbPerforming image analysis by visiting biopb endpoints
- Ji Yu
First released:
02 February 2025Last updated:
07 March 2025Installs:
33Plugin type:
Widget
Workflow step:
Image annotation
Image segmentation
AxonDeepSeg
AxonDeepSegAxon/Myelin segmentation using AI
First released:
09 December 2017Last updated:
06 March 2025Installs:
2KPlugin type:
Widget
Workflow step:
Image segmentation
Image annotation