nfinder

Automatic inference of neighboring cells based on their Delaunay triangulation.

Dependencies¶

nfinder was tested with:

• python = 3.8.5
• napari = 0.4.12
• numpy = 1.21.2
• pandas = 1.3.4
• scikit-image = 0.18.3
• scipy = 1.7.1
• importlib-resources 5.4.0

Installation¶

It can be installed with pip from PyPI:

pip install nfinder

Usage¶

For usage examples, please check out the notebook in our GitHub repository.