Yolo5 Mitosis Detector
A simple plugin to use yolo5 for mitosis detection with napari
A simple plugin to use yolo5 for mitosis detection with napari
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
Installation
You can install napari-yolo5-mitosis-detector via pip:
pip install napari-yolo5-mitosis-detector
To install latest development version :
pip install git+https://github.com/TPoquillon/napari-yolo5-mitosis-detector.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "napari-yolo5-mitosis-detector" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
Version:
- 0.0.1
Last updated:
- 2023-12-15
First released:
- 2023-12-15
License:
- BSD-3-Clause
Operating system:
- Information not submitted
Requirements:
- numpy ==1.26.2
- magicgui ==0.8.0
- qtpy ==2.4.1
- scikit-image ==0.20.0
- opencv-python ==4.8.1.78
- torch ==2.1.1
- ultralytics ==8.0.222
- shapely ==2.0.2
- importlib-resources ==6.1.1
- pandas ==2.1.3
- napari-aicsimageio ==0.7.2
- tox ; extra == 'testing'
- pytest ; extra == 'testing'
- pytest-cov ; extra == 'testing'
- pytest-qt ; extra == 'testing'
- napari ; extra == 'testing'
- pyqt5 ; extra == 'testing'